Bioclipse-R refers to the integration of the R statistical language in Bioclipse. If you use Bioclipse-R in your research, please cite:

2012 Nov 23. [Epub ahead of print] LINK TO ARTICLE |

**Getting started**

Window -> Show View -> Other... -> Scripting -> R Console will show the R console, where R code can be run interactively. Some example commands:

> 2+2 # Add numbers

[1] 4

> sin(pi/3) # Compute sinus of π/3

[1] 0.8660254

> x <- c(1,2,3,4,5,6) # Create a vector

> y <- x^2 # Square the elements of x

> y # print (vector) y

[1] 1 4 9162536

> plot(x, y) # Plots the vector x against y

> ?plot # Get help about plot command (can be used with any command)

The R editor provides convenient options for working with R scripts.

A tutorial is available for Building QSAR models for virtual screening and mutagenicity predictions with Bioclipse-R. This is also the suplementary information for the article above and includes step-by-step instructions for building and deploying predictive models using Bioclipse-R, as well as a screencast for using the resulting models.

Download Bioclipse-R

Download Bioclipse-R

Pre-built packages are available at: http://pele.farmbio.uu.se/bcr/binaries/

Alternatively, download Bioclipse and use the

*Install New Bioclipse Feature*menu to get the latest Bioclipse-R version.

Source code

Source code

Available from https://github.com/bioclipse.

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